Here are
64 public repositories
matching this topic...
WGBS/NOMe-seq Data Processing & Differential Methylation Analysis
Updated
Jul 30, 2020
Python
ViewBS - a powerful toolkit for visualization of high-throughput bisulfite sequencing data
Updated
Jul 28, 2020
Perl
DNA methylation analysis notes from Ming Tang
BISulfite-seq CUI Toolkit
Predicting regulatory DNA elements based on epigenomic signatures
Updated
Jul 17, 2018
Python
DNA methylation-based classification of central nervous system tumours
Updated
Jan 27, 2020
HTML
Modelling DNA methylation profiles
An R 📦 for fast and flexible DNA methylation analysis
R package for analyzing Infinium DNA methylation BeadChip data
Annotating epigenetic variation among samples with region sets in R
An executable and package for the statistical analysis and visualization of differentially methylated regions (DMRs) from CpG count matrices (Bismark cytosine reports)
R package for DNA methylation analysis
Tool to estimate purity of tumor samples exploiting DNA Methylation data
A chronological age predictor based on DNA methylation
A whole genome bisulfite sequencing (WGBS) pipeline for the alignment and QC of DNA methylation that goes from from raw reads (FastQ) to a CpG count matrix (Bismark cytosine reports)
Updated
Aug 6, 2020
Shell
Updated
Aug 18, 2020
Python
TFregulomeR reveals transcription factors’ context-specific features and functions
Epigenome-wide analysis of DNA methylation from Alzheimer's patients and unaffected controls
bicycle (bisulfite-based methylcytosine caller) is a next-generation sequencing bioinformatics pipeline able to perform a full DNA methylation level analysis
Updated
Apr 25, 2020
Java
A pipeline for the integration of DNA methylation and hydroxymethylation data
PipiDABS: A Comprehensive and User-Friendly Pipeline for Downstream DNA Methylation Analysis of High-throughput Bisulfite Sequencing Data.
Long sequencing reads classifier
Updated
Nov 18, 2018
Python
Analysis scripts for identification and visualization of Wilson disease-associated DNA methylation changes in human liver and blood
A pipeline to identify differentially-methylated regions from whole-genome bisulfite sequencing data
Bisulfite Sequencing Virus integration Finder
📦 🔬 R/methyvim: Targeted, Robust, and Model-free Differential Methylation Analysis
Calculate DNA methylation age using Horvath 2013 method
BioMM: Biological-informed Multi-stage Machine learning framework for phenotype prediction using omics data
Correction of batch effects in DNA methylation data
Improve this page
Add a description, image, and links to the
dna-methylation
topic page so that developers can more easily learn about it.
Curate this topic
Add this topic to your repo
To associate your repository with the
dna-methylation
topic, visit your repo's landing page and select "manage topics."
Learn more
You can’t perform that action at this time.
You signed in with another tab or window. Reload to refresh your session.
You signed out in another tab or window. Reload to refresh your session.
Hi,
The time for fastqc is not enough...
I'm getting the following error: