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1. alignmentbd alignmentbd Public

   Collection of implemented DNA sequence alignment algorithms including optimal global alignment, banded global alignment, and an approximation algorithm for multiple sequence alignment.

   C++ 2

2. PMD_Paper_Scripts PMD_Paper_Scripts Public

   A repository containing code, data, and resource links for the publication "Characterization of universal features of partially methylated domains across tissues and species"

   Shell 1

3. subecho/KarmaChameleon subecho/KarmaChameleon Public

   A Simple Karma Bot User for Slack

   Python 6 1

4. SSc-Transcriptome-Manuscript-Code SSc-Transcriptome-Manuscript-Code Public

   Code used in analysis for upcoming systemic scleroderma manuscript.

   R

5. smithlabcode/methpipe smithlabcode/methpipe Public archive

   A pipeline for analyzing DNA methylation data from bisulfite sequencing.

   C++ 71 29