fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

Configurable power menu mode for Rofi and dmenu

Gnome Shell Extension - Execute multiple shell commands periodically with separate intervals and display the output in gnome top bar.

Pop!_OS Shell

Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments

diploid SNV caller for error-prone reads

A dark Molokai color scheme for Vim

Unofficial Microsoft Teams for Linux client

RSEM: accurate quantification of gene and isoform expression from RNA-Seq data

Application for making ENCODE Blacklists

Listing of papers about machine learning for proteins.

A port of the Quake III strafe jumping mechanics to Unity3D

A port of the Quake III strafe jumping mechanics to Unity

Neatly packaged AI methods for explainable ECG analysis

A curated list of awesome Scriptable scripts and widgets.

🤗 Transformers: the model-definition framework for state-of-the-art machine learning models in text, vision, audio, and multimodal models, for both inference and training.

Library of autoencoders for sequential data

Real Time Electrocardiogram Annotation with a Long Short Term Memory Neural Network

Transformer seq2seq model, program that can build a language translator from parallel corpus

Adversarial Robustness Toolbox (ART) - Python Library for Machine Learning Security - Evasion, Poisoning, Extraction, Inference - Red and Blue Teams

MPI-IS Mesh Processing Library

Python code for paper - Variational Deep Embedding : A Generative Approach to Clustering

Repository for 'Interpretable embeddings from molecular simulations using gaussian mixture variational autoencoders'

Rust bindings for the C++ api of PyTorch.

Public repository containing materials used in LSTM article

DIA-NN - a universal automated software suite for DIA proteomics data analysis.

Show a helpful summary of test results in GitHub Actions CI/CD workflow runs

Using Biological Signals for Mass Recalibration of Mass Spectrometry Imaging Data