Burst analysis software for smFRET. **Moved to OpenSMFS organization**
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Updated
Mar 6, 2019 - Python
Burst analysis software for smFRET. **Moved to OpenSMFS organization**
Python package for site-directed spin labeling of proteins
A simulator for single molecule FRET experiments of freely diffusing particles.
FretBurstStudio is a GUI software tool for analyzing single-molecule FRET (Förster Resonance Energy Transfer) data
Nucleic acid fluorescence labeling for all-atom MD simulations
Batch processing of PicoQuant PTU files into multicolor fluorescent images. Application is meant for fast screening of images and Z-stacks during experiments. 2D_PicoQuant_ImageScreen processes intensity only, lifetime is not used.
Determine transition kinetics from single molecule FRET experiments
Single-molecule fluorescence trace extraction and analysis
A sophisticated all-in-one FRET Tool developed by SONLab Team
本软件集成了FRET分子信息与细胞表型信息的交叉分析流程,从图像预处理、分割、特征提取、特征分析、特征融合,到最后的药物药效评价,形成一整个分析链路,提供一种分析框架,提供了完善FRET-HCS的分析软件
Unet, NestedUnet, U2Net, included for Huvec cell segmentation (16bit image)
A complete end-to-end pipeline for single-molecule FRET trajectory processing, 3-state kinetic modeling with bleaching, global ensemble fitting, bootstrapping, and sensitivity analysis for Hsp90 dynamics.
Desktop tool for fluorescence plate reader analysis — DNA strand displacement, FRET, kinetic modelling | Python/PyQt5
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