Automancer is a software application that enables researchers to design, automate, and manage their experiments.

A python code to calculate the Brownian motion of colloidal particles in a time varying force field.

Deep Learning Detector for High Precision Monitoring of Cell Encapsulation Statistics in Microfluidic Droplets

molyso - Mother Machine Analysis Software

Binary ElectrohydRodyNAmIc SolvEr (BERNAISE). This fork focuses on microfluidic CFD models such as droplet formation and Dean Drag forces

Diffusion model for synthetic microscopy data generation

A Python module for controlling Elveflow microfluidic devices

A tool that generates a microfluidic chip or channel design for trapping spheroids.

Control software for CHEMYX Syringe Pump hardware. Includes core connection structures, template scripts for creating custom runs, and interactive GUIs.

Numerical library for nonlinear diffusion problems in semi-infinite domains

This directory is dedicated to the implementation of algorithms aimed at detecting droplets in microfluidic images.

PHD MA1 70-3xxx Series Syringe Pump

MYCEelium anaLYsis SOftware

Designs used in the 3DuF paper

⚛️ Nonlinear diffusion problems with JAX

Source code to our paper "On the use of a cascaded convolutional neural network for three-dimensional flow measurements using astigmatic PTV"

Library of reusable KLayout parametric components, generators, and Python macros for microfluidic, mask, and CAD layout design.

Programmatically draw 3D microfluidic chips in Fusion 360 or FreeCAD.

Pumpy3 allows you to control your Harvard syringe pump from your computer over an RS-232 interface using python 3

These are python version of codes that I wrote to analyze images and videos of a macromolecule, that I took via fluorescence microscopy, in my research in grad school.