Genome wide orthology inference and dNdS estimation
A phylogeny-aware toolkit for classifying and annotating Hierarchical Orthologous Groups (HOGs) in pangenomic datasets. It's a flexible command-line toolkit for classifying HOGs across multiple genomes in a pangenome-aware, phylogeny-informed context.
💻 Archive of my bioinformatics tool for exploring evolutionarily conserved 🧬 proteins across five model organisms using orthology databases (eggNOG, inParanoid, Homologene etc.). 🎓 Part of my PhD project, King's College London (2013-2019).
💻 Archive of my bioinformatics tool for exploring evolutionarily conserved 🧬 proteins across model organisms using Gene Ontology annotation extension. 🎓 Part of my PhD project, King's College London (2013-2019).
💻 A unified bioinformatics tool for exploring evolutionarily conserved 🧬 proteins across model organisms. Combines multi-database ortholog search with Gene Ontology annotation extension. 🎓 PhD project, King's College London (2013-2019).
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